Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK2O00526 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK2O00526 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UPK2O00526 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UPK2O00526 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
UPK2O00526 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.62□□□□□ -0.55
UPK2O00526 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UPK2O00526 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 SHC1P1-201ENST00000425230 1745 ntBASIC11.61□□□□□ -0.55
UPK2O00526 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 AC006001.1-201ENST00000325130 474 ntBASIC11.61□□□□□ -0.55
UPK2O00526 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.61□□□□□ -0.55
UPK2O00526 AC112492.5-201ENST00000421897 457 ntBASIC11.61□□□□□ -0.55
UPK2O00526 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.61□□□□□ -0.55
UPK2O00526 TTTY23B-201ENST00000442790 549 ntBASIC11.61□□□□□ -0.55
UPK2O00526 CHMP1AP1-201ENST00000445563 662 ntBASIC11.61□□□□□ -0.55
UPK2O00526 AL355994.2-201ENST00000447882 704 ntBASIC11.61□□□□□ -0.55
UPK2O00526 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK2O00526 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.61□□□□□ -0.55
UPK2O00526 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 KRT90P-201ENST00000549264 1064 ntBASIC11.61□□□□□ -0.55
UPK2O00526 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 AL355385.1-201ENST00000606123 409 ntBASIC11.61□□□□□ -0.55
UPK2O00526 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.61□□□□□ -0.55
UPK2O00526 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UPK2O00526 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.61□□□□□ -0.55
UPK2O00526 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.61□□□□□ -0.55
UPK2O00526 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UPK2O00526 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.61□□□□□ -0.55
UPK2O00526 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.6□□□□□ -0.55
UPK2O00526 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
UPK2O00526 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.6□□□□□ -0.55
UPK2O00526 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.6□□□□□ -0.55
UPK2O00526 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UPK2O00526 MIR326-201ENST00000362220 95 ntBASIC11.6□□□□□ -0.55
UPK2O00526 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms