Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 LINC00115-201ENST00000473798 1317 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 AC152010.1-201ENST00000415779 2006 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CLDN5O00501 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 AC026320.2-201ENST00000434379 478 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 RN7SL769P-201ENST00000469386 295 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN5O00501 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 AC008723.1-201ENST00000506922 207 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN5O00501 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN5O00501 PHBP15-201ENST00000574228 665 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CLDN5O00501 LINC01783-202ENST00000614408 828 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 BX284668.2-205ENST00000619677 828 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN5O00501 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 TBC1D3J-201ENST00000620719 1426 ntBASIC15.17■□□□□ 0.02
CLDN5O00501 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN5O00501 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN5O00501 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN5O00501 OR2I1P-209ENST00000641730 5365 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLDN5O00501 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 CAP2P1-201ENST00000557743 1390 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 AC091046.1-201ENST00000331871 207 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 KRT17P5-201ENST00000332088 839 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 BANF1P3-201ENST00000412556 261 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 OR8T1P-201ENST00000421347 918 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN5O00501 IGLV3-15-201ENST00000518356 244 ntBASIC15.16■□□□□ 0.02
CLDN5O00501 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.16■□□□□ 0.02
CLDN5O00501 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms