Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HFM1A2PYH4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 HERC2P11-201ENST00000562845 725 ntBASIC20.9■□□□□ 0.94
HFM1A2PYH4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 AC100756.2-201ENST00000569537 736 ntBASIC20.9■□□□□ 0.94
HFM1A2PYH4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 AC061965.1-201ENST00000560524 1465 ntBASIC20.9■□□□□ 0.94
HFM1A2PYH4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HFM1A2PYH4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
HFM1A2PYH4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HFM1A2PYH4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 AL627389.1-201ENST00000413508 1182 ntBASIC20.89■□□□□ 0.94
HFM1A2PYH4 OR52M2P-201ENST00000414298 959 ntBASIC20.89■□□□□ 0.94
HFM1A2PYH4 AC114501.1-201ENST00000445949 172 ntBASIC20.89■□□□□ 0.94
HFM1A2PYH4 LYPLA2P1-203ENST00000447689 696 ntBASIC20.89■□□□□ 0.94
HFM1A2PYH4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
HFM1A2PYH4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HFM1A2PYH4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HFM1A2PYH4 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.89■□□□□ 0.93
HFM1A2PYH4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC20.89■□□□□ 0.93
HFM1A2PYH4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HFM1A2PYH4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HFM1A2PYH4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.89■□□□□ 0.93
HFM1A2PYH4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HFM1A2PYH4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HFM1A2PYH4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
HFM1A2PYH4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.89■□□□□ 0.93
HFM1A2PYH4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 AC005722.1-201ENST00000431878 964 ntBASIC20.88■□□□□ 0.93
HFM1A2PYH4 RPL7P35-201ENST00000446943 740 ntBASIC20.88■□□□□ 0.93
HFM1A2PYH4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 RN7SL357P-201ENST00000581065 298 ntBASIC20.88■□□□□ 0.93
HFM1A2PYH4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 AL928921.2-201ENST00000641325 2442 ntBASIC20.88■□□□□ 0.93
HFM1A2PYH4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 SALL4P6-201ENST00000429385 1691 ntBASIC20.88■□□□□ 0.93
HFM1A2PYH4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HFM1A2PYH4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HFM1A2PYH4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 IGHV3-37-201ENST00000518544 340 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AP000322.3-201ENST00000608665 388 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms