Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AL596442.2-201ENST00000610240 980 ntBASIC13.71□□□□□ -0.21
AP4S1Q9Y587 BX539320.1-201ENST00000623759 877 ntBASIC13.71□□□□□ -0.21
AP4S1Q9Y587 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AC004840.1-201ENST00000636359 365 ntBASIC13.71□□□□□ -0.21
AP4S1Q9Y587 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP4S1Q9Y587 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
AP4S1Q9Y587 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 TNRC18P1-201ENST00000502875 3650 ntBASIC13.7□□□□□ -0.22
AP4S1Q9Y587 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 AL138725.1-201ENST00000407347 1314 ntBASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 AC010970.1-201ENST00000445125 1848 ntBASIC13.7□□□□□ -0.22
AP4S1Q9Y587 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 USP17L6P-201ENST00000382470 1197 ntBASIC13.7□□□□□ -0.22
AP4S1Q9Y587 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 AC092337.1-201ENST00000568699 1129 ntBASIC13.7□□□□□ -0.22
AP4S1Q9Y587 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4S1Q9Y587 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AL590627.1-203ENST00000421194 1026 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AL450487.1-201ENST00000426799 995 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ALG1L5P-201ENST00000482043 771 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 SLC25A1P1-201ENST00000528351 927 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AC044860.1-202ENST00000559481 777 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AC093813.1-201ENST00000605066 256 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms