Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MIR3180-2-201ENST00000581748 88 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC055811.3-201ENST00000584952 686 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC008805.1-201ENST00000590892 364 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC006946.3-201ENST00000609791 756 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AL109659.3-201ENST00000624985 950 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 CCNB2P1-201ENST00000399411 1150 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AC092106.1-201ENST00000444291 373 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 LINC00634-202ENST00000505157 222 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AC009088.1-201ENST00000565152 833 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 RN7SL470P-201ENST00000583069 259 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 MIR4522-201ENST00000584932 87 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 BNIP3P27-201ENST00000599991 412 ntBASIC13.96□□□□□ -0.17
LHX6Q9UPM6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX6Q9UPM6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LHX6Q9UPM6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC020931.1-201ENST00000589622 1346 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms