Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 AL008718.2-201ENST00000609206 1313 ntBASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS29Q9UBQ0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 RBM8B-201ENST00000555532 525 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC009955.4-201ENST00000597192 544 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 LINC02084-201ENST00000606069 1096 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AGAP10P-201ENST00000454844 2418 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AL031595.1-201ENST00000623969 4709 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AC244394.1-201ENST00000435000 1665 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 AL023775.1-201ENST00000454907 1746 ntBASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS29Q9UBQ0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 FAM58BP-201ENST00000439056 645 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ST13P19-201ENST00000442505 1124 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 GAPDHP21-201ENST00000450301 1010 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 RAB43P1-201ENST00000561790 589 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AL512343.1-201ENST00000605837 169 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AC021016.3-201ENST00000608367 477 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AC244157.2-201ENST00000616239 1006 ntBASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms