Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 MIR6869-201ENST00000619434 62 ntBASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCM2LQ9NUG4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.83□□□□□ -0.19
CCM2LQ9NUG4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 BTNL10-201ENST00000595971 695 ntBASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCM2LQ9NUG4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms