Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC092552.1-201ENST00000547243 906 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AL359711.2-201ENST00000563105 872 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC008494.3-201ENST00000606615 944 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC089987.1-201ENST00000551654 2209 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PIN1P1-201ENST00000412108 996 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AC131206.1-201ENST00000538078 1211 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AC140912.1-201ENST00000577171 1054 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 CICP16-201ENST00000502609 2813 ntBASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN4Q9NQP4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 MIR661-201ENST00000384842 89 ntBASIC14.36□□□□□ -0.11
PFDN4Q9NQP4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms