Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 KRT8P6-201ENST00000399259 1207 ntBASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 SAP18P2-201ENST00000434334 459 ntBASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 LINC00244-201ENST00000625073 613 ntBASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AL121949.1-201ENST00000402043 968 ntBASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 IFNWP2-201ENST00000431203 580 ntBASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC026434.2-201ENST00000506094 1078 ntBASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC120498.7-201ENST00000562876 330 ntBASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TPST2P1-201ENST00000564073 1102 ntBASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNTNAP3Q9BZ76 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.75□□□□□ -0.21
CNTNAP3Q9BZ76 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms