Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.05□□□□□ -0.64
VGLL1Q99990 AC015818.8-201ENST00000587907 1519 ntBASIC11.05□□□□□ -0.64
VGLL1Q99990 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
VGLL1Q99990 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 PMS2P2-201ENST00000425039 1128 ntBASIC11.05□□□□□ -0.64
VGLL1Q99990 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.05□□□□□ -0.64
VGLL1Q99990 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.05□□□□□ -0.64
VGLL1Q99990 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.05□□□□□ -0.64
VGLL1Q99990 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.05□□□□□ -0.64
VGLL1Q99990 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 KHSRPP1-201ENST00000427983 1768 ntBASIC11.05□□□□□ -0.64
VGLL1Q99990 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
VGLL1Q99990 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
VGLL1Q99990 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
VGLL1Q99990 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VGLL1Q99990 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 AL591122.2-201ENST00000624125 1853 ntBASIC11.04□□□□□ -0.64
VGLL1Q99990 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.04□□□□□ -0.64
VGLL1Q99990 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.04□□□□□ -0.64
VGLL1Q99990 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.04□□□□□ -0.64
VGLL1Q99990 SORD2P-201ENST00000558556 1069 ntBASIC11.04□□□□□ -0.64
VGLL1Q99990 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.04□□□□□ -0.64
VGLL1Q99990 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VGLL1Q99990 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.04□□□□□ -0.64
VGLL1Q99990 AC005498.2-205ENST00000593218 784 ntBASIC11.04□□□□□ -0.64
VGLL1Q99990 AP001002.3-201ENST00000623482 206 ntBASIC11.04□□□□□ -0.64
VGLL1Q99990 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms