Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC018629.1-201ENST00000623381 1736 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 CYP4F23P-201ENST00000593402 1579 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 TBC1D3J-201ENST00000620719 1426 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 KRT8P28-201ENST00000433288 1390 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC008723.1-201ENST00000506922 207 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PRKXP1-201ENST00000561423 1122 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 AC128714.1-201ENST00000637035 887 ntBASIC15.29■□□□□ 0.04
GCNAQ96QF7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCNAQ96QF7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.29■□□□□ 0.04
GCNAQ96QF7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AL590440.2-201ENST00000641973 1595 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 TMBIM7P-202ENST00000641474 1516 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 MIR3188-201ENST00000583494 85 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AF254983.2-201ENST00000612331 135 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AC092299.1-201ENST00000632679 757 ntBASIC15.28■□□□□ 0.04
GCNAQ96QF7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
GCNAQ96QF7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCNAQ96QF7 AC138969.2-201ENST00000532739 9932 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms