Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.85□□□□□ -0.67
RNF183Q96D59 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RNF183Q96D59 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.85□□□□□ -0.67
RNF183Q96D59 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF183Q96D59 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 AOC4P-203ENST00000566825 2289 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 TRIM80P-201ENST00000455685 2848 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.84□□□□□ -0.67
RNF183Q96D59 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 AC021723.1-201ENST00000486306 515 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 ZNF767P-206ENST00000513792 565 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 AC008825.2-201ENST00000603374 718 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 AL358472.3-201ENST00000608147 415 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.84□□□□□ -0.67
RNF183Q96D59 AC068587.10-201ENST00000641210 219 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RNF183Q96D59 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 MBLAC2-202ENST00000514906 1936 ntBASIC10.84□□□□□ -0.67
RNF183Q96D59 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF183Q96D59 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF183Q96D59 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.83□□□□□ -0.67
RNF183Q96D59 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
RNF183Q96D59 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 INE2-201ENST00000630399 1874 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 AC138028.6-201ENST00000616106 1482 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 AP001972.5-201ENST00000624624 2338 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 KRT8P29-201ENST00000420409 1371 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 RN7SKP230-201ENST00000365642 335 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms