Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AL161932.2-201ENST00000435436 679 ntBASIC12.84□□□□□ -0.35
APH1AQ96BI3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 ST13P19-201ENST00000442505 1124 ntBASIC12.84□□□□□ -0.35
APH1AQ96BI3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AC022217.1-201ENST00000521069 738 ntBASIC12.84□□□□□ -0.35
APH1AQ96BI3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AL031595.1-201ENST00000623969 4709 ntBASIC12.84□□□□□ -0.35
APH1AQ96BI3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 AC131212.3-201ENST00000624087 4219 ntBASIC12.84□□□□□ -0.35
APH1AQ96BI3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.84□□□□□ -0.35
APH1AQ96BI3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APH1AQ96BI3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
APH1AQ96BI3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
APH1AQ96BI3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.83□□□□□ -0.35
APH1AQ96BI3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.83□□□□□ -0.35
APH1AQ96BI3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC011498.7-201ENST00000624986 2027 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 RN7SKP214-201ENST00000364208 315 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 KRT18P36-201ENST00000411618 1276 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 XBP1P1-201ENST00000436573 652 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 PGAM1P5-201ENST00000548011 764 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC003686.1-201ENST00000550956 1034 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.83□□□□□ -0.36
APH1AQ96BI3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.83□□□□□ -0.36
APH1AQ96BI3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APH1AQ96BI3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms