Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AC008536.3-201ENST00000623282 1599 ntBASIC14.15□□□□□ -0.14
CLDN23Q96B33 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 KRT8P30-201ENST00000432100 650 ntBASIC14.15□□□□□ -0.14
CLDN23Q96B33 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 GGNBP1-204ENST00000613113 887 ntBASIC14.15□□□□□ -0.14
CLDN23Q96B33 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN23Q96B33 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN23Q96B33 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.15□□□□□ -0.15
CLDN23Q96B33 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.15
CLDN23Q96B33 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN23Q96B33 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AL157823.1-201ENST00000403727 628 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 IFNWP2-201ENST00000431203 580 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 COQ10BP2-201ENST00000513804 724 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 RN7SL605P-201ENST00000577229 281 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 AL049840.2-201ENST00000602722 535 ntBASIC14.14□□□□□ -0.15
CLDN23Q96B33 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN23Q96B33 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms