Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 AC090643.2-201ENST00000623442 2029 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 DUX4L50-201ENST00000455245 715 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 AC016629.1-201ENST00000596579 586 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.93■□□□□ 0.3
STAG1Q8WVM7 SHMT1P1-201ENST00000419974 1312 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 LINC00115-201ENST00000473798 1317 ntBASIC16.93■□□□□ 0.3
STAG1Q8WVM7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 AL365209.1-201ENST00000624418 6473 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 AC103592.1-201ENST00000394513 664 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 AC007274.2-201ENST00000421675 662 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 POU5F1P2-201ENST00000521750 823 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 MIR3907-201ENST00000579424 151 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
STAG1Q8WVM7 SNX18-202ENST00000343017 3140 ntBASIC16.92■□□□□ 0.3
STAG1Q8WVM7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.91■□□□□ 0.3
STAG1Q8WVM7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms