Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC8.61□□□□□ -1.03
SVIPQ8NHG7 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SKA1-201ENST00000285116 2905 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 PDZRN3-203ENST00000462146 2927 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DHRS4-AS1-205ENST00000556379 2852 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 RPS6KA1-216ENST00000530003 3023 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 GBAP1-201ENST00000368374 1873 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 TAF8-210ENST00000494547 2402 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 CYP21A1P-202ENST00000354927 1481 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ITGBL1-201ENST00000376162 2007 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 LINC00968-201ENST00000499425 2366 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AL121672.2-201ENST00000412643 867 ntTSL 3 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AC092098.1-201ENST00000429245 874 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AL390763.1-201ENST00000454492 346 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 MTCO3P42-201ENST00000509488 518 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 MTCO3P39-201ENST00000514812 518 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AC011477.4-201ENST00000590274 609 ntTSL 3 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 OPRM1-202ENST00000330432 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DLD-201ENST00000205402 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 FADS2P1-201ENST00000611807 1446 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 BRD7P1-201ENST00000557705 1915 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AL137918.1-201ENST00000624542 1922 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SEC14L2-202ENST00000405717 1733 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 OLA1P3-201ENST00000550756 2555 ntBASIC8.6□□□□□ -1.03
SVIPQ8NHG7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SVIPQ8NHG7 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 ZNF558-201ENST00000301475 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 LINC02211-203ENST00000642022 2816 ntBASIC8.59□□□□□ -1.03
SVIPQ8NHG7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SVIPQ8NHG7 LYAR-202ENST00000452476 1468 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms