Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC215219.1-201ENST00000400706 1817 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 DRD5P1-201ENST00000456605 1438 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 NUS1P3-201ENST00000423502 862 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC092337.1-201ENST00000568699 1129 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MIR3687-2-201ENST00000577708 61 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC092364.2-202ENST00000597012 1073 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC107373.2-201ENST00000607735 490 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AL596442.2-201ENST00000610240 980 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MIR3687-1-201ENST00000614492 61 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC015819.3-201ENST00000624305 2674 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC027369.3-201ENST00000530465 3707 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 AC087499.5-201ENST00000452760 1342 ntBASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.55□□□□□ -0.4
BEST4Q8NFU0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms