Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 KLF2P1-201ENST00000447438 1042 ntBASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 DUX4L45-201ENST00000566406 1057 ntBASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC090505.1-201ENST00000430515 1834 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 YBX1P6-201ENST00000442962 1002 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 RPL13AP20-201ENST00000459725 609 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AL583810.1-201ENST00000553344 1045 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AC027601.3-201ENST00000622907 509 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 AL033527.4-201ENST00000641026 673 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIMC1Q8NDZ2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms