Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM50Q86XT4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AC015656.1-201ENST00000624209 3578 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 OR8T1P-201ENST00000421347 918 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AL592076.1-201ENST00000424448 303 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AC022447.6-201ENST00000515522 438 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 MIR6727-201ENST00000620702 65 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AC011491.1-203ENST00000637688 543 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 BRD7P5-201ENST00000299197 1822 ntBASIC16.08■□□□□ 0.16
TRIM50Q86XT4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM50Q86XT4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AL161932.2-201ENST00000435436 679 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 FTH1P22-201ENST00000456305 520 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC104784.1-201ENST00000473096 294 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC005586.2-201ENST00000563946 837 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC135983.4-201ENST00000564116 1262 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC021016.3-201ENST00000608367 477 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AL591471.1-201ENST00000621855 229 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AC090386.2-201ENST00000623010 1039 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 LAP3P2-201ENST00000454686 1454 ntBASIC16.07■□□□□ 0.16
TRIM50Q86XT4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms