Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AC044849.1-201ENST00000519737 1188 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AC133540.1-201ENST00000620845 1019 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AC068587.8-201ENST00000641239 219 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 HSPA8P5-201ENST00000456928 2069 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 DPM3-202ENST00000368399 517 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 MIR1247-201ENST00000408206 136 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GPAA1P2-201ENST00000417923 928 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 KRT8P13-201ENST00000463294 1010 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 AC099548.2-209ENST00000480264 625 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 HLA-J-204ENST00000495278 958 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 AC106794.1-201ENST00000506935 792 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 RN7SL163P-201ENST00000583100 276 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 AC090164.2-201ENST00000611487 516 ntBASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD3Q7Z3D4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms