Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 KHSRPP1-201ENST00000427983 1768 ntBASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AC093525.8-201ENST00000624099 1342 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AL133338.1-201ENST00000565695 1517 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AGGF1P1-201ENST00000509500 2073 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PHKG1P2-201ENST00000457537 863 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 HNRNPUP1-201ENST00000554987 333 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 MIR5189-201ENST00000577370 114 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AC067750.1-201ENST00000608826 6545 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 Z97205.2-201ENST00000564697 1639 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 KRT8P37-201ENST00000451609 1420 ntBASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXR1Q6PIV2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC004987.2-201ENST00000395959 1148 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 FAM21FP-201ENST00000426241 1131 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 AL442647.2-201ENST00000429864 857 ntBASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXR1Q6PIV2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms