Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 RBM8B-201ENST00000555532 525 ntBASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 NDUFV2P1-201ENST00000596415 907 ntBASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 AL645939.5-201ENST00000606834 243 ntBASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 AC144522.1-201ENST00000625111 1658 ntBASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD3Q6PCD5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC105206.1-202ENST00000314927 2368 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 CYP46A4P-201ENST00000414953 267 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 SPTLC1P5-201ENST00000450718 252 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC006122.1-201ENST00000493323 440 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 MARK2P5-201ENST00000507649 634 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AC026740.1-201ENST00000607068 791 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 AL136295.7-201ENST00000619226 1200 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TUBBP5-203ENST00000508529 1334 ntBASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFWD3Q6PCD5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 AC009093.10-201ENST00000641956 1442 ntBASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 TCAF1P1-201ENST00000414990 2232 ntBASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 MST1P2-201ENST00000457982 2291 ntBASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFWD3Q6PCD5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms