Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 TMEM198B-204ENST00000484016 896 ntBASIC17.28■□□□□ 0.36
RNF20Q5VTR2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC010328.2-201ENST00000597698 1111 ntBASIC17.28■□□□□ 0.36
RNF20Q5VTR2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF20Q5VTR2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.27■□□□□ 0.36
RNF20Q5VTR2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 KLF2P1-201ENST00000447438 1042 ntBASIC17.27■□□□□ 0.36
RNF20Q5VTR2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF20Q5VTR2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF20Q5VTR2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 AC119751.2-201ENST00000504529 210 ntBASIC17.26■□□□□ 0.35
RNF20Q5VTR2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF20Q5VTR2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms