Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 AL365181.3-201ENST00000605886 3222 ntBASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 LINC01815-202ENST00000641468 1409 ntBASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.44□□□□□ -0.42
RSPO1Q2MKA7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 HMGA1P1-201ENST00000415560 1062 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC078875.1-201ENST00000431907 724 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 RPS2P32-201ENST00000439199 892 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC009779.1-201ENST00000551138 283 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 NCLP1-201ENST00000445357 1963 ntBASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RSPO1Q2MKA7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms