Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 KRT18P45-201ENST00000515347 1333 ntBASIC18.59■□□□□ 0.57
COL16A1Q07092 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 HMGA1P1-201ENST00000415560 1062 ntBASIC18.59■□□□□ 0.57
COL16A1Q07092 AL137077.1-201ENST00000442115 528 ntBASIC18.59■□□□□ 0.57
COL16A1Q07092 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC18.59■□□□□ 0.57
COL16A1Q07092 RN7SL340P-201ENST00000470792 296 ntBASIC18.59■□□□□ 0.57
COL16A1Q07092 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC18.59■□□□□ 0.57
COL16A1Q07092 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC18.59■□□□□ 0.57
COL16A1Q07092 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC18.59■□□□□ 0.57
COL16A1Q07092 KRT127P-201ENST00000547183 433 ntBASIC18.59■□□□□ 0.57
COL16A1Q07092 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC18.59■□□□□ 0.57
COL16A1Q07092 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL16A1Q07092 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC18.59■□□□□ 0.57
COL16A1Q07092 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC18.59■□□□□ 0.57
COL16A1Q07092 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL16A1Q07092 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.58■□□□□ 0.57
COL16A1Q07092 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
COL16A1Q07092 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL16A1Q07092 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC18.58■□□□□ 0.57
COL16A1Q07092 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL16A1Q07092 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC18.58■□□□□ 0.56
COL16A1Q07092 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 PTPA-219ENST00000435305 530 ntTSL 2 BASIC18.58■□□□□ 0.56
COL16A1Q07092 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC18.58■□□□□ 0.56
COL16A1Q07092 MTHFD2P7-201ENST00000483867 983 ntBASIC18.58■□□□□ 0.56
COL16A1Q07092 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC18.58■□□□□ 0.56
COL16A1Q07092 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC18.58■□□□□ 0.56
COL16A1Q07092 DDX11L8-201ENST00000535849 366 ntBASIC18.58■□□□□ 0.56
COL16A1Q07092 MIR1587-201ENST00000583319 53 ntBASIC18.58■□□□□ 0.56
COL16A1Q07092 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC18.58■□□□□ 0.56
COL16A1Q07092 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC18.58■□□□□ 0.56
COL16A1Q07092 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC18.58■□□□□ 0.56
COL16A1Q07092 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL16A1Q07092 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
COL16A1Q07092 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.58■□□□□ 0.56
COL16A1Q07092 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL16A1Q07092 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 AL162727.3-201ENST00000635661 2787 ntBASIC18.58■□□□□ 0.56
COL16A1Q07092 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL16A1Q07092 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.58■□□□□ 0.56
COL16A1Q07092 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.58■□□□□ 0.56
COL16A1Q07092 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.57■□□□□ 0.56
COL16A1Q07092 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.57■□□□□ 0.56
COL16A1Q07092 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC18.57■□□□□ 0.56
COL16A1Q07092 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 HNRNPA1P11-201ENST00000580106 956 ntBASIC18.57■□□□□ 0.56
COL16A1Q07092 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC18.57■□□□□ 0.56
COL16A1Q07092 AC009779.7-201ENST00000609031 469 ntBASIC18.57■□□□□ 0.56
COL16A1Q07092 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC18.57■□□□□ 0.56
COL16A1Q07092 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC18.57■□□□□ 0.56
COL16A1Q07092 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.57■□□□□ 0.56
COL16A1Q07092 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL16A1Q07092 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.57■□□□□ 0.56
COL16A1Q07092 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms