Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.77□□□□□ -0.2
CHRNB3Q05901 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.77□□□□□ -0.2
CHRNB3Q05901 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.77□□□□□ -0.2
CHRNB3Q05901 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRNB3Q05901 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRNB3Q05901 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRNB3Q05901 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CHRNB3Q05901 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRNB3Q05901 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRNB3Q05901 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.77□□□□□ -0.2
CHRNB3Q05901 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 SORD2P-201ENST00000558556 1069 ntBASIC13.77□□□□□ -0.21
CHRNB3Q05901 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRNB3Q05901 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.77□□□□□ -0.21
CHRNB3Q05901 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.77□□□□□ -0.21
CHRNB3Q05901 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.77□□□□□ -0.21
CHRNB3Q05901 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.77□□□□□ -0.21
CHRNB3Q05901 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRNB3Q05901 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 MEP1AP4-201ENST00000423244 1087 ntBASIC13.76□□□□□ -0.21
CHRNB3Q05901 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 VDAC1P7-201ENST00000462417 847 ntBASIC13.76□□□□□ -0.21
CHRNB3Q05901 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 RPL13AP25-201ENST00000484130 612 ntBASIC13.76□□□□□ -0.21
CHRNB3Q05901 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 SPDYE22P-201ENST00000582158 798 ntBASIC13.76□□□□□ -0.21
CHRNB3Q05901 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRNB3Q05901 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRNB3Q05901 AC025048.6-201ENST00000634326 1161 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms