Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TUBB1P2-201ENST00000422712 1306 ntBASIC13.62□□□□□ -0.23
TRA2BP62995 TUBB1P1-201ENST00000503144 1300 ntBASIC13.62□□□□□ -0.23
TRA2BP62995 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRA2BP62995 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRA2BP62995 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRA2BP62995 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 AC023794.5-201ENST00000564380 2157 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.61□□□□□ -0.23
TRA2BP62995 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 AL591846.1-201ENST00000451736 433 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 RPL13AP20-201ENST00000459725 609 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 AL583810.1-201ENST00000553344 1045 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.61□□□□□ -0.23
TRA2BP62995 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 RN7SL163P-201ENST00000583100 276 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.61□□□□□ -0.23
TRA2BP62995 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.61□□□□□ -0.23
TRA2BP62995 AL136295.7-201ENST00000619226 1200 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 AC022748.3-201ENST00000621828 275 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 AC018629.1-201ENST00000623381 1736 ntBASIC13.61□□□□□ -0.23
TRA2BP62995 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRA2BP62995 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRA2BP62995 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.61□□□□□ -0.23
TRA2BP62995 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRA2BP62995 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRA2BP62995 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.6□□□□□ -0.23
TRA2BP62995 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRA2BP62995 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRA2BP62995 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.6□□□□□ -0.23
TRA2BP62995 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRA2BP62995 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.6□□□□□ -0.23
TRA2BP62995 AC004899.1-201ENST00000424687 1714 ntBASIC13.6□□□□□ -0.23
TRA2BP62995 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.6□□□□□ -0.23
TRA2BP62995 RNMTL1P1-201ENST00000454103 560 ntBASIC13.6□□□□□ -0.23
TRA2BP62995 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.6□□□□□ -0.23
TRA2BP62995 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.6□□□□□ -0.23
TRA2BP62995 FAM8A2P-201ENST00000528813 1142 ntBASIC13.6□□□□□ -0.23
TRA2BP62995 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.6□□□□□ -0.23
TRA2BP62995 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.6□□□□□ -0.23
TRA2BP62995 AC007663.3-201ENST00000609632 465 ntBASIC13.6□□□□□ -0.23
TRA2BP62995 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRA2BP62995 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.6□□□□□ -0.23
TRA2BP62995 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms