Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.89□□□□□ -0.19
VSX2P58304 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VSX2P58304 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 TUBBP5-203ENST00000508529 1334 ntBASIC13.89□□□□□ -0.19
VSX2P58304 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VSX2P58304 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VSX2P58304 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
VSX2P58304 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 AC018629.1-201ENST00000623381 1736 ntBASIC13.88□□□□□ -0.19
VSX2P58304 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.88□□□□□ -0.19
VSX2P58304 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VSX2P58304 BCYRN1-201ENST00000418539 200 ntBASIC13.88□□□□□ -0.19
VSX2P58304 AC078875.1-201ENST00000431907 724 ntBASIC13.88□□□□□ -0.19
VSX2P58304 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.88□□□□□ -0.19
VSX2P58304 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.88□□□□□ -0.19
VSX2P58304 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.88□□□□□ -0.19
VSX2P58304 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.88□□□□□ -0.19
VSX2P58304 AC092299.1-201ENST00000632679 757 ntBASIC13.88□□□□□ -0.19
VSX2P58304 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VSX2P58304 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VSX2P58304 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.88□□□□□ -0.19
VSX2P58304 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.88□□□□□ -0.19
VSX2P58304 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VSX2P58304 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VSX2P58304 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VSX2P58304 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VSX2P58304 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 RN7SKP214-201ENST00000364208 315 ntBASIC13.87□□□□□ -0.19
VSX2P58304 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 MIR769-201ENST00000390225 118 ntBASIC13.87□□□□□ -0.19
VSX2P58304 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 CYP46A4P-201ENST00000414953 267 ntBASIC13.87□□□□□ -0.19
VSX2P58304 SPTLC1P5-201ENST00000450718 252 ntBASIC13.87□□□□□ -0.19
VSX2P58304 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 AC005586.2-201ENST00000563946 837 ntBASIC13.87□□□□□ -0.19
VSX2P58304 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.87□□□□□ -0.19
VSX2P58304 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VSX2P58304 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms