Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN6P56747 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN6P56747 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN6P56747 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN6P56747 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CLDN6P56747 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.83□□□□□ -0.19
CLDN6P56747 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN6P56747 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CLDN6P56747 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 AC092135.3-201ENST00000624151 1846 ntBASIC13.83□□□□□ -0.2
CLDN6P56747 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN6P56747 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 KRT8P1-201ENST00000557533 1207 ntBASIC13.83□□□□□ -0.2
CLDN6P56747 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDN6P56747 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN6P56747 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CLDN6P56747 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN6P56747 BRD7P5-201ENST00000299197 1822 ntBASIC13.83□□□□□ -0.2
CLDN6P56747 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN6P56747 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.83□□□□□ -0.2
CLDN6P56747 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 AC021305.1-201ENST00000520656 1514 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 AC092580.1-201ENST00000433998 658 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN6P56747 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN6P56747 OR5BD1P-201ENST00000532527 817 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.82□□□□□ -0.2
CLDN6P56747 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLDN6P56747 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN6P56747 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms