Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH12P55289 POM121L8P-201ENST00000417732 1281 ntBASIC13.54□□□□□ -0.24
CDH12P55289 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 ACTG1P3-201ENST00000431775 1114 ntBASIC13.54□□□□□ -0.24
CDH12P55289 POM121L9P-203ENST00000441984 1285 ntBASIC13.54□□□□□ -0.24
CDH12P55289 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH12P55289 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.54□□□□□ -0.24
CDH12P55289 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 PTP4A1P2-201ENST00000546033 454 ntBASIC13.54□□□□□ -0.24
CDH12P55289 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH12P55289 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 ENPP7P14-201ENST00000621765 1040 ntBASIC13.54□□□□□ -0.24
CDH12P55289 RPSAP52-203ENST00000622976 1023 ntBASIC13.54□□□□□ -0.24
CDH12P55289 AP001002.3-201ENST00000623482 206 ntBASIC13.54□□□□□ -0.24
CDH12P55289 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDH12P55289 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 AC020658.7-201ENST00000624274 2442 ntBASIC13.54□□□□□ -0.24
CDH12P55289 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CDH12P55289 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDH12P55289 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH12P55289 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH12P55289 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH12P55289 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDH12P55289 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.53□□□□□ -0.24
CDH12P55289 TDH-203ENST00000531764 1110 ntBASIC13.53□□□□□ -0.24
CDH12P55289 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.53□□□□□ -0.24
CDH12P55289 MIR5189-201ENST00000577370 114 ntBASIC13.53□□□□□ -0.24
CDH12P55289 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 AC010319.3-201ENST00000597028 470 ntBASIC13.53□□□□□ -0.24
CDH12P55289 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 AC138466.3-201ENST00000619983 221 ntBASIC13.53□□□□□ -0.24
CDH12P55289 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.53□□□□□ -0.24
CDH12P55289 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDH12P55289 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 AL138709.1-201ENST00000614840 1693 ntBASIC13.53□□□□□ -0.24
CDH12P55289 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDH12P55289 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDH12P55289 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms