Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
BRPF1P55201 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 LINC01230-201ENST00000625222 3017 ntBASIC18.33■□□□□ 0.52
BRPF1P55201 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.33■□□□□ 0.52
BRPF1P55201 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 AL008707.1-201ENST00000422498 534 ntBASIC18.33■□□□□ 0.52
BRPF1P55201 AC069218.1-201ENST00000435269 762 ntBASIC18.33■□□□□ 0.52
BRPF1P55201 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.33■□□□□ 0.52
BRPF1P55201 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.33■□□□□ 0.52
BRPF1P55201 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.33■□□□□ 0.52
BRPF1P55201 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.33■□□□□ 0.52
BRPF1P55201 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BRPF1P55201 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.33■□□□□ 0.52
BRPF1P55201 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BRPF1P55201 AL157996.1-201ENST00000624684 2299 ntBASIC18.33■□□□□ 0.52
BRPF1P55201 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.33■□□□□ 0.52
BRPF1P55201 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 RPL13AP3-202ENST00000494676 1473 ntBASIC18.33■□□□□ 0.52
BRPF1P55201 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.33■□□□□ 0.52
BRPF1P55201 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRPF1P55201 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
BRPF1P55201 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 AC015656.1-201ENST00000624209 3578 ntBASIC18.32■□□□□ 0.52
BRPF1P55201 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.32■□□□□ 0.52
BRPF1P55201 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.32■□□□□ 0.52
BRPF1P55201 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.32■□□□□ 0.52
BRPF1P55201 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRPF1P55201 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
BRPF1P55201 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BRPF1P55201 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRPF1P55201 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.31■□□□□ 0.52
BRPF1P55201 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 AC011742.3-201ENST00000439053 820 ntBASIC18.31■□□□□ 0.52
BRPF1P55201 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.31■□□□□ 0.52
BRPF1P55201 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.31■□□□□ 0.52
BRPF1P55201 AC093752.3-201ENST00000567343 901 ntBASIC18.31■□□□□ 0.52
BRPF1P55201 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.31■□□□□ 0.52
BRPF1P55201 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms