Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.94■□□□□ 0.3
CACNB3P54284 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CACNB3P54284 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNB3P54284 FLJ16779-201ENST00000612722 7638 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNB3P54284 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 RNVU1-8-201ENST00000364272 125 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNB3P54284 RPL35P9-201ENST00000446059 350 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.93■□□□□ 0.3
CACNB3P54284 AC093826.1-201ENST00000508655 993 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.93■□□□□ 0.3
CACNB3P54284 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 KRT8P2-201ENST00000556193 944 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.93■□□□□ 0.3
CACNB3P54284 MIR4472-1-201ENST00000584349 80 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.93■□□□□ 0.3
CACNB3P54284 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CACNB3P54284 KRT8P18-201ENST00000413425 1445 ntBASIC16.93■□□□□ 0.3
CACNB3P54284 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CACNB3P54284 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.93■□□□□ 0.3
CACNB3P54284 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CACNB3P54284 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CACNB3P54284 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.92■□□□□ 0.3
CACNB3P54284 AC145285.5-201ENST00000562217 361 ntBASIC16.92■□□□□ 0.3
CACNB3P54284 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.92■□□□□ 0.3
CACNB3P54284 AL118522.1-201ENST00000611368 560 ntBASIC16.92■□□□□ 0.3
CACNB3P54284 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 TSPY26P-202ENST00000565928 3884 ntBASIC16.92■□□□□ 0.3
CACNB3P54284 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 AC007686.3-201ENST00000619017 3487 ntBASIC16.92■□□□□ 0.3
CACNB3P54284 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
CACNB3P54284 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CACNB3P54284 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNB3P54284 AC067930.6-201ENST00000623257 4947 ntBASIC16.92■□□□□ 0.3
CACNB3P54284 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.91■□□□□ 0.3
CACNB3P54284 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.91■□□□□ 0.3
CACNB3P54284 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CACNB3P54284 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNB3P54284 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNB3P54284 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms