Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.24□□□□□ -0.29
CENPAP49450 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CENPAP49450 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 PIN1P1-201ENST00000412108 996 ntBASIC13.24□□□□□ -0.29
CENPAP49450 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 AC002472.2-201ENST00000442739 958 ntBASIC13.24□□□□□ -0.29
CENPAP49450 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 AC131206.1-201ENST00000538078 1211 ntBASIC13.24□□□□□ -0.29
CENPAP49450 WASH4P-201ENST00000564273 1246 ntBASIC13.24□□□□□ -0.29
CENPAP49450 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.24□□□□□ -0.29
CENPAP49450 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.24□□□□□ -0.29
CENPAP49450 AC004466.1-201ENST00000599515 1080 ntBASIC13.24□□□□□ -0.29
CENPAP49450 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 INE2-201ENST00000630399 1874 ntBASIC13.24□□□□□ -0.29
CENPAP49450 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CENPAP49450 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.24□□□□□ -0.29
CENPAP49450 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CENPAP49450 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 AC012617.1-204ENST00000586340 2305 ntBASIC13.23□□□□□ -0.29
CENPAP49450 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CENPAP49450 BCRP1-201ENST00000444246 691 ntBASIC13.23□□□□□ -0.29
CENPAP49450 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.23□□□□□ -0.29
CENPAP49450 MIR4745-201ENST00000577608 62 ntBASIC13.23□□□□□ -0.29
CENPAP49450 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 AL096865.1-201ENST00000606796 927 ntBASIC13.23□□□□□ -0.29
CENPAP49450 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.23□□□□□ -0.29
CENPAP49450 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms