Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 RN7SL560P-201ENST00000577943 264 ntBASIC12.91□□□□□ -0.34
CSNK1A1P48729 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 TMBIM7P-202ENST00000641474 1516 ntBASIC12.91□□□□□ -0.34
CSNK1A1P48729 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 AL008718.2-201ENST00000609206 1313 ntBASIC12.9□□□□□ -0.34
CSNK1A1P48729 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 AL162426.1-201ENST00000624141 743 ntBASIC12.9□□□□□ -0.34
CSNK1A1P48729 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSNK1A1P48729 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSNK1A1P48729 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CSNK1A1P48729 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CSNK1A1P48729 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 BTBD6P1-201ENST00000412176 1267 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms