Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MIR611-201ENST00000384869 67 ntBASIC14.54□□□□□ -0.08
LTBRP36941 DKKL1P1-201ENST00000400550 698 ntBASIC14.54□□□□□ -0.08
LTBRP36941 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.54□□□□□ -0.08
LTBRP36941 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 CCND3P1-201ENST00000438347 580 ntBASIC14.54□□□□□ -0.08
LTBRP36941 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.54□□□□□ -0.08
LTBRP36941 RPSAP70-201ENST00000504462 864 ntBASIC14.54□□□□□ -0.08
LTBRP36941 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 ISL1-203ENST00000511384 981 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.54□□□□□ -0.08
LTBRP36941 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.54□□□□□ -0.08
LTBRP36941 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LTBRP36941 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.54□□□□□ -0.08
LTBRP36941 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBRP36941 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBRP36941 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LTBRP36941 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBRP36941 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.53□□□□□ -0.08
LTBRP36941 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 KRT18P44-201ENST00000416086 1285 ntBASIC14.53□□□□□ -0.08
LTBRP36941 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 SNRPCP15-201ENST00000424055 192 ntBASIC14.53□□□□□ -0.08
LTBRP36941 PGK1P2-201ENST00000431702 1214 ntBASIC14.53□□□□□ -0.08
LTBRP36941 AC006328.1-201ENST00000437571 379 ntBASIC14.53□□□□□ -0.08
LTBRP36941 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.53□□□□□ -0.08
LTBRP36941 AC099328.1-201ENST00000498809 1030 ntBASIC14.53□□□□□ -0.08
LTBRP36941 AC026412.1-206ENST00000502273 206 ntBASIC14.53□□□□□ -0.08
LTBRP36941 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.53□□□□□ -0.08
LTBRP36941 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 ACTBP9-201ENST00000587663 1099 ntBASIC14.53□□□□□ -0.08
LTBRP36941 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 AC006986.1-201ENST00000612764 241 ntBASIC14.53□□□□□ -0.08
LTBRP36941 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LTBRP36941 AL512324.3-201ENST00000619383 882 ntBASIC14.53□□□□□ -0.08
LTBRP36941 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LTBRP36941 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBRP36941 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBRP36941 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LTBRP36941 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LTBRP36941 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBRP36941 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBRP36941 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBRP36941 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.52□□□□□ -0.08
LTBRP36941 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.52□□□□□ -0.08
LTBRP36941 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBRP36941 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms