Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PDE6BP35913 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6BP35913 AC138035.3-201ENST00000622706 2791 ntBASIC17.58■□□□□ 0.4
PDE6BP35913 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6BP35913 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6BP35913 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PDE6BP35913 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6BP35913 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
PDE6BP35913 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDE6BP35913 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PDE6BP35913 AP000244.1-201ENST00000424582 201 ntBASIC17.57■□□□□ 0.4
PDE6BP35913 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.57■□□□□ 0.4
PDE6BP35913 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 STK24P1-201ENST00000455035 1291 ntBASIC17.57■□□□□ 0.4
PDE6BP35913 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
PDE6BP35913 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.57■□□□□ 0.4
PDE6BP35913 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.57■□□□□ 0.4
PDE6BP35913 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.57■□□□□ 0.4
PDE6BP35913 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6BP35913 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDE6BP35913 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDE6BP35913 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6BP35913 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 NHP2P1-201ENST00000335274 462 ntBASIC17.56■□□□□ 0.4
PDE6BP35913 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PDE6BP35913 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDE6BP35913 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6BP35913 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 AC093300.1-201ENST00000510368 1201 ntBASIC17.56■□□□□ 0.4
PDE6BP35913 KNOP1P1-201ENST00000542108 989 ntBASIC17.56■□□□□ 0.4
PDE6BP35913 RN7SL455P-201ENST00000580629 282 ntBASIC17.56■□□□□ 0.4
PDE6BP35913 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.56■□□□□ 0.4
PDE6BP35913 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PDE6BP35913 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6BP35913 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6BP35913 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6BP35913 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 OR2W2P-201ENST00000406313 909 ntBASIC17.55■□□□□ 0.4
PDE6BP35913 FAM21EP-201ENST00000417804 985 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms