Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 AL662844.4-201ENST00000606367 2838 ntBASIC18.3■□□□□ 0.52
RXRBP28702 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.3■□□□□ 0.52
RXRBP28702 EEF1DP2-201ENST00000433698 843 ntBASIC18.3■□□□□ 0.52
RXRBP28702 AC007690.1-201ENST00000451924 468 ntBASIC18.3■□□□□ 0.52
RXRBP28702 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC18.3■□□□□ 0.52
RXRBP28702 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC18.3■□□□□ 0.52
RXRBP28702 ELOBP2-201ENST00000526184 355 ntBASIC18.3■□□□□ 0.52
RXRBP28702 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.3■□□□□ 0.52
RXRBP28702 AL603832.2-201ENST00000566195 2125 ntBASIC18.3■□□□□ 0.52
RXRBP28702 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.3■□□□□ 0.52
RXRBP28702 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 CICP23-201ENST00000605013 2741 ntBASIC18.3■□□□□ 0.52
RXRBP28702 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RXRBP28702 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RXRBP28702 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC18.3■□□□□ 0.52
RXRBP28702 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RXRBP28702 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RXRBP28702 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 MRPS16P3-201ENST00000415961 374 ntBASIC18.29■□□□□ 0.52
RXRBP28702 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC18.29■□□□□ 0.52
RXRBP28702 ASLP1-201ENST00000428790 637 ntBASIC18.29■□□□□ 0.52
RXRBP28702 AL161932.2-201ENST00000435436 679 ntBASIC18.29■□□□□ 0.52
RXRBP28702 ATP5G1P7-201ENST00000444398 400 ntBASIC18.29■□□□□ 0.52
RXRBP28702 RPSAP16-201ENST00000447583 821 ntBASIC18.29■□□□□ 0.52
RXRBP28702 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.29■□□□□ 0.52
RXRBP28702 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RXRBP28702 AC009132.1-201ENST00000565194 320 ntBASIC18.29■□□□□ 0.52
RXRBP28702 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.29■□□□□ 0.52
RXRBP28702 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 AC073592.10-201ENST00000624789 597 ntBASIC18.29■□□□□ 0.52
RXRBP28702 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RXRBP28702 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.29■□□□□ 0.52
RXRBP28702 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RXRBP28702 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 AC084018.2-201ENST00000613093 2607 ntBASIC18.28■□□□□ 0.52
RXRBP28702 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RXRBP28702 TCAF2P1-201ENST00000291129 2421 ntBASIC18.28■□□□□ 0.52
RXRBP28702 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.28■□□□□ 0.52
RXRBP28702 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms