Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CHMP24386 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CHMP24386 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHMP24386 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
CHMP24386 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.59□□□□□ -0.23
CHMP24386 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.59□□□□□ -0.23
CHMP24386 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CHMP24386 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.59□□□□□ -0.23
CHMP24386 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CHMP24386 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.59□□□□□ -0.23
CHMP24386 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 CLUHP2-201ENST00000426660 1303 ntBASIC13.59□□□□□ -0.23
CHMP24386 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHMP24386 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.59□□□□□ -0.23
CHMP24386 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.59□□□□□ -0.23
CHMP24386 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.58□□□□□ -0.23
CHMP24386 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CHMP24386 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.58□□□□□ -0.23
CHMP24386 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHMP24386 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHMP24386 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.58□□□□□ -0.23
CHMP24386 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHMP24386 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CHMP24386 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CHMP24386 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHMP24386 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.58□□□□□ -0.24
CHMP24386 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms