Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.56□□□□□ -0.24
NR4A1P22736 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
NR4A1P22736 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NR4A1P22736 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 AC020910.6-201ENST00000623084 1459 ntBASIC13.55□□□□□ -0.24
NR4A1P22736 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
NR4A1P22736 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 AC005014.1-201ENST00000432006 2976 ntBASIC13.55□□□□□ -0.24
NR4A1P22736 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.55□□□□□ -0.24
NR4A1P22736 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.55□□□□□ -0.24
NR4A1P22736 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.55□□□□□ -0.24
NR4A1P22736 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.55□□□□□ -0.24
NR4A1P22736 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.55□□□□□ -0.24
NR4A1P22736 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.55□□□□□ -0.24
NR4A1P22736 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.55□□□□□ -0.24
NR4A1P22736 CHCHD2P3-201ENST00000603038 451 ntBASIC13.55□□□□□ -0.24
NR4A1P22736 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
NR4A1P22736 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 AL158212.4-201ENST00000624062 1286 ntBASIC13.55□□□□□ -0.24
NR4A1P22736 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 AL358472.5-202ENST00000641448 1267 ntBASIC13.55□□□□□ -0.24
NR4A1P22736 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.55□□□□□ -0.24
NR4A1P22736 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.55□□□□□ -0.24
NR4A1P22736 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NR4A1P22736 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
NR4A1P22736 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NR4A1P22736 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NR4A1P22736 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NR4A1P22736 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.54□□□□□ -0.24
NR4A1P22736 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NR4A1P22736 AC036164.1-201ENST00000570544 333 ntBASIC13.54□□□□□ -0.24
NR4A1P22736 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 AC093726.1-201ENST00000608064 963 ntBASIC13.54□□□□□ -0.24
NR4A1P22736 AL391069.4-201ENST00000609583 481 ntBASIC13.54□□□□□ -0.24
NR4A1P22736 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NR4A1P22736 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.54□□□□□ -0.24
NR4A1P22736 AC025048.6-201ENST00000634326 1161 ntBASIC13.54□□□□□ -0.24
NR4A1P22736 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NR4A1P22736 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.54□□□□□ -0.24
NR4A1P22736 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
NR4A1P22736 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NR4A1P22736 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.54□□□□□ -0.24
NR4A1P22736 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NR4A1P22736 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
NR4A1P22736 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NR4A1P22736 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms