Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CGB3P0DN86 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CGB3P0DN86 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.83□□□□□ -0.52
CGB3P0DN86 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CGB3P0DN86 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
CGB3P0DN86 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CGB3P0DN86 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
CGB3P0DN86 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CGB3P0DN86 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CGB3P0DN86 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CGB3P0DN86 HMGA1P1-201ENST00000415560 1062 ntBASIC11.82□□□□□ -0.52
CGB3P0DN86 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC078875.1-201ENST00000431907 724 ntBASIC11.82□□□□□ -0.52
CGB3P0DN86 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.82□□□□□ -0.52
CGB3P0DN86 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC090164.2-201ENST00000611487 516 ntBASIC11.82□□□□□ -0.52
CGB3P0DN86 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.82□□□□□ -0.52
CGB3P0DN86 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.82□□□□□ -0.52
CGB3P0DN86 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 AC111170.3-201ENST00000624282 2464 ntBASIC11.82□□□□□ -0.52
CGB3P0DN86 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CGB3P0DN86 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.82□□□□□ -0.52
CGB3P0DN86 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.81□□□□□ -0.52
CGB3P0DN86 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CGB3P0DN86 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 AC130686.1-201ENST00000622936 2466 ntBASIC11.81□□□□□ -0.52
CGB3P0DN86 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.81□□□□□ -0.52
CGB3P0DN86 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.81□□□□□ -0.52
CGB3P0DN86 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.81□□□□□ -0.52
CGB3P0DN86 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.81□□□□□ -0.52
CGB3P0DN86 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.81□□□□□ -0.52
CGB3P0DN86 AC009779.1-201ENST00000551138 283 ntBASIC11.81□□□□□ -0.52
CGB3P0DN86 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 AL132994.2-201ENST00000603120 687 ntBASIC11.81□□□□□ -0.52
CGB3P0DN86 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.81□□□□□ -0.52
CGB3P0DN86 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms