Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC005740.2-201ENST00000511085 419 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC009779.1-201ENST00000551138 283 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AP002353.1-201ENST00000528257 1599 ntBASIC14.63□□□□□ -0.07
HLA-DQB2P05538 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DQB2P05538 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 MIR4538-201ENST00000581377 78 ntBASIC14.62□□□□□ -0.07
HLA-DQB2P05538 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AL451050.2-201ENST00000606967 682 ntBASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AL136295.7-201ENST00000619226 1200 ntBASIC14.62□□□□□ -0.07
HLA-DQB2P05538 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DQB2P05538 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC004898.1-201ENST00000451057 766 ntBASIC14.61□□□□□ -0.07
HLA-DQB2P05538 AC092658.1-201ENST00000505836 891 ntBASIC14.61□□□□□ -0.07
HLA-DQB2P05538 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms