Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.18□□□□□ -0.46
CD74P04233 AC009477.1-201ENST00000452936 217 ntBASIC12.18□□□□□ -0.46
CD74P04233 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 HLA-J-203ENST00000494367 1087 ntBASIC12.18□□□□□ -0.46
CD74P04233 SPDYE18-201ENST00000510091 1050 ntBASIC12.18□□□□□ -0.46
CD74P04233 POLD2P1-201ENST00000511220 997 ntBASIC12.18□□□□□ -0.46
CD74P04233 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CD74P04233 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.18□□□□□ -0.46
CD74P04233 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.18□□□□□ -0.46
CD74P04233 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.18□□□□□ -0.46
CD74P04233 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.18□□□□□ -0.46
CD74P04233 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CD74P04233 AC060814.4-201ENST00000594169 2163 ntBASIC12.18□□□□□ -0.46
CD74P04233 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 GHET1-201ENST00000627071 1906 ntBASIC12.17□□□□□ -0.46
CD74P04233 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.17□□□□□ -0.46
CD74P04233 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.17□□□□□ -0.46
CD74P04233 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 CNN2P2-201ENST00000443536 909 ntBASIC12.17□□□□□ -0.46
CD74P04233 CNN2P3-201ENST00000450201 906 ntBASIC12.17□□□□□ -0.46
CD74P04233 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.17□□□□□ -0.46
CD74P04233 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 MESTP3-201ENST00000503460 968 ntBASIC12.17□□□□□ -0.46
CD74P04233 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.17□□□□□ -0.46
CD74P04233 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.17□□□□□ -0.46
CD74P04233 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.17□□□□□ -0.46
CD74P04233 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 AP005019.2-201ENST00000615104 511 ntBASIC12.17□□□□□ -0.46
CD74P04233 AL136317.3-201ENST00000618497 906 ntBASIC12.17□□□□□ -0.46
CD74P04233 AC139530.3-201ENST00000620344 690 ntBASIC12.17□□□□□ -0.46
CD74P04233 CR392039.2-201ENST00000623182 509 ntBASIC12.17□□□□□ -0.46
CD74P04233 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 AC009093.10-201ENST00000641956 1442 ntBASIC12.17□□□□□ -0.46
CD74P04233 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CD74P04233 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD74P04233 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD74P04233 AC020910.5-201ENST00000623668 1865 ntBASIC12.17□□□□□ -0.46
CD74P04233 VENTXP1-201ENST00000569334 2716 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms