Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 AL645937.2-201ENST00000396808 931 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 HLA-K-203ENST00000430151 1046 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.48□□□□□ -0.57
IFNA1P01562 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.48□□□□□ -0.57
IFNA1P01562 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.48□□□□□ -0.57
IFNA1P01562 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.48□□□□□ -0.57
IFNA1P01562 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.48□□□□□ -0.57
IFNA1P01562 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
IFNA1P01562 MRPL37P1-201ENST00000592451 1337 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 SALL4P5-201ENST00000419001 1760 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 VENTXP1-201ENST00000569334 2716 ntBASIC11.48□□□□□ -0.57
IFNA1P01562 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.48□□□□□ -0.57
IFNA1P01562 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.48□□□□□ -0.57
IFNA1P01562 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
IFNA1P01562 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
IFNA1P01562 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 AL359845.1-201ENST00000458202 1648 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
IFNA1P01562 USP17L6P-201ENST00000382470 1197 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 TLE1P1-201ENST00000422965 589 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 AC007969.1-201ENST00000433675 447 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 AK2P2-201ENST00000439142 405 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.47□□□□□ -0.57
IFNA1P01562 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
IFNA1P01562 AC034105.1-201ENST00000563488 319 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 AC026150.2-201ENST00000564693 1156 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
IFNA1P01562 FAM215A-202ENST00000632077 792 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
IFNA1P01562 AC022400.8-201ENST00000623453 3599 ntBASIC11.47□□□□□ -0.57
IFNA1P01562 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.47□□□□□ -0.57
IFNA1P01562 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.47□□□□□ -0.57
IFNA1P01562 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IFNA1P01562 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms