Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC023051.2-201ENST00000541141 460 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 RN7SL300P-201ENST00000582522 318 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 MEP1AP1-201ENST00000636082 1097 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 AC026691.1-201ENST00000602502 2017 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC21■□□□□ 0.95
RAPGEF3O95398 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RAPGEF3O95398 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RAPGEF3O95398 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 LCK-206ENST00000373564 2137 ntTSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 AC093106.1-201ENST00000437271 352 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 HNRNPA3P12-201ENST00000437410 1063 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RAPGEF3O95398 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 COQ10BP2-201ENST00000513804 724 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC21■□□□□ 0.95
RAPGEF3O95398 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC21■□□□□ 0.95
RAPGEF3O95398 TPST2P1-201ENST00000564073 1102 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 AC112220.4-201ENST00000604982 1263 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 AP006248.1-201ENST00000610471 67 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 Z82244.2-201ENST00000632196 448 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAPGEF3O95398 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 RPL4P6-201ENST00000438116 1304 ntBASIC21■□□□□ 0.95
RAPGEF3O95398 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPGEF3O95398 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 AC091951.1-201ENST00000512854 2465 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 OR7E155P-201ENST00000412208 1014 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 RNASEH2CP1-201ENST00000454281 502 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 OR52V1P-201ENST00000515557 898 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 SRPK2P-201ENST00000523408 1100 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 MIR5091-201ENST00000578707 93 ntBASIC20.99■□□□□ 0.95
RAPGEF3O95398 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.99■□□□□ 0.95
RAPGEF3O95398 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAPGEF3O95398 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
RAPGEF3O95398 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF3O95398 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms