Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1FO60840 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1FO60840 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.74■□□□□ 0.43
CACNA1FO60840 MIR4326-201ENST00000582203 59 ntBASIC17.74■□□□□ 0.43
CACNA1FO60840 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC002044.2-201ENST00000624910 970 ntBASIC17.74■□□□□ 0.43
CACNA1FO60840 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1FO60840 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1FO60840 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1FO60840 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1FO60840 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1FO60840 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 AC138932.1-201ENST00000534164 6830 ntBASIC17.74■□□□□ 0.43
CACNA1FO60840 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1FO60840 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1FO60840 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.73■□□□□ 0.43
CACNA1FO60840 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 MIR3180-2-201ENST00000581748 88 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.73■□□□□ 0.43
CACNA1FO60840 RN7SL556P-201ENST00000582856 298 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CACNA1FO60840 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 AGAP10P-201ENST00000454844 2418 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC139749.1-202ENST00000617529 3139 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC092573.1-201ENST00000433054 884 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.73■□□□□ 0.43
CACNA1FO60840 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1FO60840 AC140113.1-201ENST00000603467 169 ntBASIC17.73■□□□□ 0.43
CACNA1FO60840 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1FO60840 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CACNA1FO60840 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1FO60840 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1FO60840 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CACNA1FO60840 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1FO60840 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1FO60840 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.72■□□□□ 0.43
CACNA1FO60840 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.72■□□□□ 0.43
CACNA1FO60840 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.72■□□□□ 0.43
CACNA1FO60840 AC007279.1-201ENST00000448547 837 ntBASIC17.72■□□□□ 0.43
CACNA1FO60840 RN7SL8P-201ENST00000461771 266 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms