Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TUBB8P4-201ENST00000511806 1324 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.95□□□□□ -0.34
ZIC3O60481 RN7SL769P-201ENST00000469386 295 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.95□□□□□ -0.34
ZIC3O60481 RN7SL720P-201ENST00000488178 304 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 IMP3P2-201ENST00000489760 475 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 AC008723.1-201ENST00000506922 207 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 RTN3P1-201ENST00000536295 711 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ZIC3O60481 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 AL109837.1-201ENST00000603272 613 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 AC079336.7-201ENST00000623428 1078 ntBASIC12.95□□□□□ -0.34
ZIC3O60481 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 AC016397.2-201ENST00000624848 1985 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 LINC00115-201ENST00000473798 1317 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 HSPA7-201ENST00000445535 1927 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ZIC3O60481 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ZIC3O60481 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 USP17L6P-201ENST00000382470 1197 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 UPF3AP2-201ENST00000457924 1132 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 KRT18P15-201ENST00000458108 1291 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.94□□□□□ -0.34
ZIC3O60481 AC116345.2-201ENST00000512837 523 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.94□□□□□ -0.34
ZIC3O60481 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 KRT8P1-201ENST00000557533 1207 ntBASIC12.94□□□□□ -0.34
ZIC3O60481 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.94□□□□□ -0.34
ZIC3O60481 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.94□□□□□ -0.34
ZIC3O60481 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.94□□□□□ -0.34
ZIC3O60481 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.94□□□□□ -0.34
ZIC3O60481 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZIC3O60481 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms