Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC28A1O00337 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.96□□□□□ -0.18
SLC28A1O00337 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC28A1O00337 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
SLC28A1O00337 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC28A1O00337 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.96□□□□□ -0.18
SLC28A1O00337 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.96□□□□□ -0.18
SLC28A1O00337 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.96□□□□□ -0.18
SLC28A1O00337 AC005252.3-201ENST00000623855 2258 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 AC105206.1-202ENST00000314927 2368 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AL355994.2-201ENST00000447882 704 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AC007551.1-201ENST00000457394 519 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.95□□□□□ -0.18
SLC28A1O00337 KRT18P8-201ENST00000581937 1246 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 BTNL10-201ENST00000595971 695 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 AC008735.3-201ENST00000596646 500 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AL136301.1-201ENST00000615830 422 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLC28A1O00337 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC28A1O00337 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 SHC1P1-201ENST00000425230 1745 ntBASIC13.95□□□□□ -0.18
SLC28A1O00337 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC28A1O00337 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLC28A1O00337 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SLC28A1O00337 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SLC28A1O00337 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC072061.1-201ENST00000569710 2234 ntBASIC13.94□□□□□ -0.18
SLC28A1O00337 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC28A1O00337 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC28A1O00337 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC28A1O00337 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SLC28A1O00337 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC28A1O00337 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC244669.2-201ENST00000612320 853 ntBASIC13.94□□□□□ -0.18
SLC28A1O00337 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC28A1O00337 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC025048.6-201ENST00000634326 1161 ntBASIC13.94□□□□□ -0.18
SLC28A1O00337 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC28A1O00337 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC28A1O00337 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC28A1O00337 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms