Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PPP1R14BP3-201ENST00000509033 445 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 EGLN1P1-201ENST00000531623 762 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 GRAP-204ENST00000573099 846 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 MIR4313-201ENST00000580760 101 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AL390719.2-201ENST00000606993 987 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC018892.3-201ENST00000623986 2499 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF614-201ENST00000270649 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 GID4-202ENST00000376345 1391 ntTSL 3 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 RELA-227ENST00000615805 2236 ntTSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 HERC2P2-201ENST00000613386 5181 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 FGF5-203ENST00000456523 5234 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC7A11-AS1-202ENST00000510767 4654 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AC008620.2-201ENST00000510294 1569 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PRR31-201ENST00000371629 978 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 CD99-202ENST00000381180 530 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 HMGA1P5-201ENST00000412453 271 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SPDYE21P-201ENST00000413323 827 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AC087163.2-201ENST00000457299 853 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 MIR4321-201ENST00000592276 80 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AL353135.1-201ENST00000606729 504 ntBASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AL353801.3-201ENST00000609898 542 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms