Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 CXCL1P1-201ENST00000502804 216 ntBASIC10.27□□□□□ -0.77
TMEM238C9JI98 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.27□□□□□ -0.77
TMEM238C9JI98 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 MED24-212ENST00000501516 3037 ntTSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
TMEM238C9JI98 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
TMEM238C9JI98 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AC007614.5-201ENST00000623424 8892 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 EEF1DP4-201ENST00000446006 880 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AC108751.1-201ENST00000490852 363 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AC061975.2-201ENST00000581722 295 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AL121912.1-201ENST00000603683 238 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 AC097359.3-201ENST00000603982 1210 ntBASIC10.26□□□□□ -0.77
TMEM238C9JI98 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TMEM238C9JI98 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC10.26□□□□□ -0.77
TMEM238C9JI98 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC10.25□□□□□ -0.77
TMEM238C9JI98 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.25□□□□□ -0.77
TMEM238C9JI98 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM238C9JI98 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms