Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 TUBB1P1-201ENST00000503144 1300 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 GOLGA2P8-201ENST00000505201 779 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 IGHV3-71-201ENST00000523324 359 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AP002353.1-201ENST00000528257 1599 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC061965.1-201ENST00000560524 1465 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 AC009542.2-202ENST00000619004 1067 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AC072061.1-201ENST00000569710 2234 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AC004899.1-201ENST00000424687 1714 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MIR658-201ENST00000385210 100 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AL391647.1-201ENST00000395664 511 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 RN7SL163P-201ENST00000583100 276 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AL132994.2-201ENST00000603120 687 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 AC068587.8-201ENST00000641239 219 ntBASIC12.74□□□□□ -0.37
NPIPB4C9JG80 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPB4C9JG80 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms